Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Gm15352-201ENSMUST00000118696 270 ntBASIC11.87□□□□□ -0.51
Colca2F8VPY8 Gm7722-201ENSMUST00000120646 741 ntBASIC11.87□□□□□ -0.51
Colca2F8VPY8 Gm13263-201ENSMUST00000121271 838 ntBASIC11.87□□□□□ -0.51
Colca2F8VPY8 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Colca2F8VPY8 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Gm22442-201ENSMUST00000157256 144 ntBASIC11.87□□□□□ -0.51
Colca2F8VPY8 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Gm44980-201ENSMUST00000205826 314 ntBASIC11.87□□□□□ -0.51
Colca2F8VPY8 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Colca2F8VPY8 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.87□□□□□ -0.51
Colca2F8VPY8 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.87□□□□□ -0.51
Colca2F8VPY8 AC174797.2-202ENSMUST00000225729 568 ntBASIC11.87□□□□□ -0.51
Colca2F8VPY8 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC11.87□□□□□ -0.51
Colca2F8VPY8 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Colca2F8VPY8 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Colca2F8VPY8 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.86□□□□□ -0.51
Colca2F8VPY8 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Colca2F8VPY8 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Rprl1-201ENSMUST00000158050 327 ntBASIC11.86□□□□□ -0.51
Colca2F8VPY8 Gm23045-201ENSMUST00000175041 96 ntBASIC11.86□□□□□ -0.51
Colca2F8VPY8 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Gm28686-201ENSMUST00000187404 609 ntBASIC11.86□□□□□ -0.51
Colca2F8VPY8 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Colca2F8VPY8 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.85□□□□□ -0.51
Colca2F8VPY8 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Gm1848-201ENSMUST00000120711 789 ntBASIC11.85□□□□□ -0.51
Colca2F8VPY8 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.85□□□□□ -0.51
Colca2F8VPY8 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Colca2F8VPY8 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms