Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Gm13492-201ENSMUST00000119772 665 ntBASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Gm31256-201ENSMUST00000194705 506 ntBASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Gm38092-201ENSMUST00000195600 653 ntBASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Mir433-201ENSMUST00000093564 124 ntBASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pcdh17E9PXF0 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Gm2546-201ENSMUST00000182630 991 ntBASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.78□□□□□ -0.52
Pcdh17E9PXF0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.77□□□□□ -0.52
Pcdh17E9PXF0 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh17E9PXF0 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Pcdh17E9PXF0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh17E9PXF0 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh17E9PXF0 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.77□□□□□ -0.52
Pcdh17E9PXF0 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh17E9PXF0 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh17E9PXF0 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh17E9PXF0 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh17E9PXF0 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms