Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sptbn4E9PX29 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sptbn4E9PX29 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sptbn4E9PX29 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sptbn4E9PX29 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Sptbn4E9PX29 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.28□□□□□ -0.6
Sptbn4E9PX29 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sptbn4E9PX29 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Sptbn4E9PX29 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sptbn4E9PX29 Gm3726-201ENSMUST00000203110 785 ntBASIC11.28□□□□□ -0.6
Sptbn4E9PX29 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.28□□□□□ -0.6
Sptbn4E9PX29 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sptbn4E9PX29 Gm23680-201ENSMUST00000083162 164 ntBASIC11.28□□□□□ -0.6
Sptbn4E9PX29 n-R5s185-201ENSMUST00000083953 119 ntBASIC11.28□□□□□ -0.6
Sptbn4E9PX29 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sptbn4E9PX29 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sptbn4E9PX29 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sptbn4E9PX29 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.28□□□□□ -0.6
Sptbn4E9PX29 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.28□□□□□ -0.6
Sptbn4E9PX29 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Sptbn4E9PX29 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Sptbn4E9PX29 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sptbn4E9PX29 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sptbn4E9PX29 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sptbn4E9PX29 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sptbn4E9PX29 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sptbn4E9PX29 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Sptbn4E9PX29 Gm25053-201ENSMUST00000103982 133 ntBASIC11.27□□□□□ -0.6
Sptbn4E9PX29 Gm25922-201ENSMUST00000104281 130 ntBASIC11.27□□□□□ -0.6
Sptbn4E9PX29 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Sptbn4E9PX29 Gm24679-201ENSMUST00000158762 111 ntBASIC11.27□□□□□ -0.6
Sptbn4E9PX29 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Sptbn4E9PX29 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.27□□□□□ -0.6
Sptbn4E9PX29 Gm25053-202ENSMUST00000199731 132 ntBASIC11.27□□□□□ -0.6
Sptbn4E9PX29 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sptbn4E9PX29 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.27□□□□□ -0.6
Sptbn4E9PX29 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sptbn4E9PX29 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Sptbn4E9PX29 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Sptbn4E9PX29 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Sptbn4E9PX29 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sptbn4E9PX29 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Sptbn4E9PX29 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Sptbn4E9PX29 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Sptbn4E9PX29 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sptbn4E9PX29 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Sptbn4E9PX29 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Sptbn4E9PX29 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sptbn4E9PX29 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sptbn4E9PX29 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Sptbn4E9PX29 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.27□□□□□ -0.6
Sptbn4E9PX29 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sptbn4E9PX29 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sptbn4E9PX29 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sptbn4E9PX29 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sptbn4E9PX29 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sptbn4E9PX29 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sptbn4E9PX29 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sptbn4E9PX29 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sptbn4E9PX29 Gm25766-201ENSMUST00000104101 131 ntBASIC11.27□□□□□ -0.61
Sptbn4E9PX29 Gm14234-201ENSMUST00000119539 845 ntBASIC11.27□□□□□ -0.61
Sptbn4E9PX29 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC11.27□□□□□ -0.61
Sptbn4E9PX29 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC11.27□□□□□ -0.61
Sptbn4E9PX29 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Sptbn4E9PX29 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Sptbn4E9PX29 Gm43912-201ENSMUST00000204352 538 ntBASIC11.27□□□□□ -0.61
Sptbn4E9PX29 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sptbn4E9PX29 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.27□□□□□ -0.61
Sptbn4E9PX29 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Sptbn4E9PX29 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sptbn4E9PX29 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sptbn4E9PX29 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sptbn4E9PX29 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sptbn4E9PX29 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sptbn4E9PX29 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sptbn4E9PX29 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sptbn4E9PX29 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sptbn4E9PX29 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Sptbn4E9PX29 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sptbn4E9PX29 Gm24398-201ENSMUST00000157870 109 ntBASIC11.26□□□□□ -0.61
Sptbn4E9PX29 Gm16296-201ENSMUST00000159905 325 ntBASIC11.26□□□□□ -0.61
Sptbn4E9PX29 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC11.26□□□□□ -0.61
Sptbn4E9PX29 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.26□□□□□ -0.61
Sptbn4E9PX29 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Sptbn4E9PX29 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.26□□□□□ -0.61
Sptbn4E9PX29 Gm45135-201ENSMUST00000206787 1184 ntBASIC11.26□□□□□ -0.61
Sptbn4E9PX29 Gm18968-201ENSMUST00000221319 862 ntBASIC11.26□□□□□ -0.61
Sptbn4E9PX29 Gm26448-201ENSMUST00000082446 203 ntBASIC11.26□□□□□ -0.61
Sptbn4E9PX29 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sptbn4E9PX29 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sptbn4E9PX29 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sptbn4E9PX29 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Sptbn4E9PX29 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sptbn4E9PX29 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sptbn4E9PX29 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Sptbn4E9PX29 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sptbn4E9PX29 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sptbn4E9PX29 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sptbn4E9PX29 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.26□□□□□ -0.61
Sptbn4E9PX29 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms