Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Gm13910-201ENSMUST00000121752 1428 ntBASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Hfm1D3Z4R1 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Gm14247-201ENSMUST00000120950 237 ntBASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Gm29499-201ENSMUST00000189151 486 ntBASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Gm28329-201ENSMUST00000191208 689 ntBASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Gm29171-201ENSMUST00000191397 486 ntBASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Gm19009-201ENSMUST00000223072 823 ntBASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 AC165260.2-203ENSMUST00000224237 336 ntBASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 CT025553.1-201ENSMUST00000226292 299 ntBASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 AC121960.1-201ENSMUST00000227982 564 ntBASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hfm1D3Z4R1 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 Gm6198-201ENSMUST00000191337 2929 ntBASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 Gm12856-201ENSMUST00000119471 1293 ntBASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 Gm22442-201ENSMUST00000157256 144 ntBASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 CT485606.1-201ENSMUST00000213187 878 ntBASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 AC115122.1-201ENSMUST00000224850 1040 ntBASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 Gm10152-201ENSMUST00000193475 1344 ntBASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hfm1D3Z4R1 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 AC154671.1-201ENSMUST00000228617 1578 ntBASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Gm25076-201ENSMUST00000104098 132 ntBASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Gm14193-201ENSMUST00000105067 153 ntBASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Gm12816-201ENSMUST00000118069 1212 ntBASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Gm44711-201ENSMUST00000205414 1264 ntBASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Gm5879-201ENSMUST00000089501 1209 ntBASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hfm1D3Z4R1 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms