Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Gm27525-201ENSMUST00000184465 107 ntBASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Gm38294-201ENSMUST00000192831 381 ntBASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Gm6458-201ENSMUST00000211573 635 ntBASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Gm6888-201ENSMUST00000221983 706 ntBASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Gm12887B1AVM1 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Gm11524-201ENSMUST00000119349 807 ntBASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Gm8000-201ENSMUST00000188378 592 ntBASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Gm19078-201ENSMUST00000206311 727 ntBASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 AC139580.1-202ENSMUST00000223574 928 ntBASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms