Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cfap99A0A140LIX9 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cfap99A0A140LIX9 Gm10782-202ENSMUST00000223775 1480 ntBASIC15.14■□□□□ 0.01
Cfap99A0A140LIX9 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cfap99A0A140LIX9 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cfap99A0A140LIX9 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Nsd1-205ENSMUST00000224693 852 ntBASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cfap99A0A140LIX9 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 Gm2606-201ENSMUST00000100754 1002 ntBASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 Gm7293-201ENSMUST00000216682 1007 ntBASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cfap99A0A140LIX9 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 Gm11978-201ENSMUST00000122315 466 ntBASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 Gm8176-201ENSMUST00000191297 1099 ntBASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 Gm19963-201ENSMUST00000208413 1255 ntBASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 Gm43289-201ENSMUST00000200537 1475 ntBASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cfap99A0A140LIX9 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cfap99A0A140LIX9 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Cfap99A0A140LIX9 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.1■□□□□ 0.01
Cfap99A0A140LIX9 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cfap99A0A140LIX9 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cfap99A0A140LIX9 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cfap99A0A140LIX9 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cfap99A0A140LIX9 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cfap99A0A140LIX9 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cfap99A0A140LIX9 AC116503.1-201ENSMUST00000215445 2192 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms