Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 AC159195.3-201ENSMUST00000225162 2211 ntBASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm42141-201ENSMUST00000196534 2172 ntBASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm45841-201ENSMUST00000207700 164 ntBASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm45684-201ENSMUST00000210244 1571 ntBASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm15240-201ENSMUST00000118156 720 ntBASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm44344-201ENSMUST00000200287 129 ntBASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 AC124732.2-201ENSMUST00000221977 316 ntBASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Chchd1-203ENSMUST00000224633 557 ntBASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm8396-201ENSMUST00000057361 823 ntBASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms