Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Mir6392-201ENSMUST00000184924 108 ntBASIC9.46□□□□□ -0.9
Trav6n-6A0A075B6B2 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC9.46□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC9.46□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm7498-201ENSMUST00000203282 1084 ntBASIC9.46□□□□□ -0.9
Trav6n-6A0A075B6B2 AC122305.4-201ENSMUST00000216159 1206 ntBASIC9.46□□□□□ -0.9
Trav6n-6A0A075B6B2 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC9.46□□□□□ -0.9
Trav6n-6A0A075B6B2 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav6n-6A0A075B6B2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav6n-6A0A075B6B2 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav6n-6A0A075B6B2 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav6n-6A0A075B6B2 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav6n-6A0A075B6B2 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav6n-6A0A075B6B2 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav6n-6A0A075B6B2 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Trav6n-6A0A075B6B2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav6n-6A0A075B6B2 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav6n-6A0A075B6B2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav6n-6A0A075B6B2 AC124433.1-202ENSMUST00000224762 1535 ntBASIC9.46□□□□□ -0.9
Trav6n-6A0A075B6B2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav6n-6A0A075B6B2 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC9.46□□□□□ -0.9
Trav6n-6A0A075B6B2 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav6n-6A0A075B6B2 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav6n-6A0A075B6B2 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm8617-201ENSMUST00000118796 2222 ntBASIC9.46□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm43984-201ENSMUST00000204572 2864 ntBASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm8515-201ENSMUST00000194852 576 ntBASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm19078-201ENSMUST00000206311 727 ntBASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm18307-201ENSMUST00000206864 949 ntBASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Wdyhv1-206ENSMUST00000227142 786 ntBASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm38037-201ENSMUST00000192600 1624 ntBASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC9.45□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm6210-201ENSMUST00000204734 1942 ntBASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 AL593843.1-201ENSMUST00000195891 145 ntBASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm43094-201ENSMUST00000196549 921 ntBASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm18018-201ENSMUST00000198273 408 ntBASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm18624-201ENSMUST00000220966 658 ntBASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms