Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Gm2495-201ENSMUST00000191160 466 ntBASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
H2afb3S4R1G7 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
H2afb3S4R1G7 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
H2afb3S4R1G7 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
H2afb3S4R1G7 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
H2afb3S4R1G7 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
H2afb3S4R1G7 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
H2afb3S4R1G7 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
H2afb3S4R1G7 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Auts2-212ENSMUST00000178555 309 ntBASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Gm28911-201ENSMUST00000188837 117 ntBASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb3S4R1G7 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Gm13612-201ENSMUST00000119276 390 ntBASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Gm12091-201ENSMUST00000146791 830 ntBASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms