Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl40Q9Z2Q5 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm2231-201ENSMUST00000125661 612 ntBASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm27243-201ENSMUST00000183964 521 ntBASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm44364-201ENSMUST00000198368 141 ntBASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm10608-202ENSMUST00000213924 676 ntBASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Mrpl40Q9Z2Q5 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
Mrpl40Q9Z2Q5 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Mrpl40Q9Z2Q5 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Mrpl40Q9Z2Q5 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Mrpl40Q9Z2Q5 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Mrpl40Q9Z2Q5 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Mrpl40Q9Z2Q5 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Mrpl40Q9Z2Q5 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Mrpl40Q9Z2Q5 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Mrpl40Q9Z2Q5 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Mrpl40Q9Z2Q5 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.71□□□□□ -0.38
Mrpl40Q9Z2Q5 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Mrpl40Q9Z2Q5 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Mrpl40Q9Z2Q5 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.71□□□□□ -0.38
Mrpl40Q9Z2Q5 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Gm11793-201ENSMUST00000120433 981 ntBASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Gm13350-201ENSMUST00000120519 479 ntBASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Gm25261-201ENSMUST00000157416 134 ntBASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Gm26185-201ENSMUST00000157692 266 ntBASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Gm7584-201ENSMUST00000175829 940 ntBASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl40Q9Z2Q5 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mrpl40Q9Z2Q5 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mrpl40Q9Z2Q5 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms