Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.8□□□□□ -0.36
Crlf3Q9Z2L7 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Gm18018-201ENSMUST00000198273 408 ntBASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Gm15823-201ENSMUST00000064305 670 ntBASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crlf3Q9Z2L7 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crlf3Q9Z2L7 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crlf3Q9Z2L7 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crlf3Q9Z2L7 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crlf3Q9Z2L7 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crlf3Q9Z2L7 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crlf3Q9Z2L7 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Crlf3Q9Z2L7 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Crlf3Q9Z2L7 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Crlf3Q9Z2L7 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crlf3Q9Z2L7 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Crlf3Q9Z2L7 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
Crlf3Q9Z2L7 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crlf3Q9Z2L7 Mir686-201ENSMUST00000102174 109 ntBASIC12.78□□□□□ -0.36
Crlf3Q9Z2L7 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Crlf3Q9Z2L7 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.78□□□□□ -0.36
Crlf3Q9Z2L7 Gm11978-201ENSMUST00000122315 466 ntBASIC12.78□□□□□ -0.36
Crlf3Q9Z2L7 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Crlf3Q9Z2L7 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Crlf3Q9Z2L7 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.78□□□□□ -0.36
Crlf3Q9Z2L7 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Crlf3Q9Z2L7 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.78□□□□□ -0.36
Crlf3Q9Z2L7 Gm45668-201ENSMUST00000211271 493 ntBASIC12.78□□□□□ -0.36
Crlf3Q9Z2L7 Gm18624-201ENSMUST00000220966 658 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms