Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn9Q9Z0S7 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Gm15703-201ENSMUST00000120250 880 ntBASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Gm16177-201ENSMUST00000120728 718 ntBASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Gm43818-201ENSMUST00000200605 466 ntBASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn9Q9Z0S7 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Gm4984-201ENSMUST00000115987 360 ntBASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Gm1335-201ENSMUST00000121653 386 ntBASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Gm11424-201ENSMUST00000121929 829 ntBASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Gm27682-201ENSMUST00000183930 110 ntBASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Gm38092-201ENSMUST00000195600 653 ntBASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn9Q9Z0S7 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cldn9Q9Z0S7 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cldn9Q9Z0S7 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cldn9Q9Z0S7 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms