Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Clcf1Q9QZM3 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Clcf1Q9QZM3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.51□□□□□ -0.57
Clcf1Q9QZM3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Clcf1Q9QZM3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clcf1Q9QZM3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clcf1Q9QZM3 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Clcf1Q9QZM3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clcf1Q9QZM3 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clcf1Q9QZM3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clcf1Q9QZM3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clcf1Q9QZM3 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Gm17208-201ENSMUST00000168388 535 ntBASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Gm3890-201ENSMUST00000182416 207 ntBASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Gm27501-201ENSMUST00000183599 107 ntBASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.5□□□□□ -0.57
Clcf1Q9QZM3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Gm19931-201ENSMUST00000198920 368 ntBASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Gm32025-201ENSMUST00000217960 307 ntBASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Gm45930-201ENSMUST00000221330 292 ntBASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Olfr582-201ENSMUST00000098212 960 ntBASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clcf1Q9QZM3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.48□□□□□ -0.57
Clcf1Q9QZM3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms