Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
Hmgn5Q9JL35 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn5Q9JL35 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn5Q9JL35 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn5Q9JL35 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn5Q9JL35 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.21□□□□□ -0.13
Hmgn5Q9JL35 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn5Q9JL35 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn5Q9JL35 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn5Q9JL35 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn5Q9JL35 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC14.21□□□□□ -0.13
Hmgn5Q9JL35 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
Hmgn5Q9JL35 Gm16202-201ENSMUST00000117532 544 ntBASIC14.21□□□□□ -0.13
Hmgn5Q9JL35 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Hmgn5Q9JL35 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn5Q9JL35 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Hmgn5Q9JL35 Chchd1-203ENSMUST00000224633 557 ntBASIC14.21□□□□□ -0.13
Hmgn5Q9JL35 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.21□□□□□ -0.13
Hmgn5Q9JL35 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn5Q9JL35 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hmgn5Q9JL35 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
Hmgn5Q9JL35 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn5Q9JL35 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgn5Q9JL35 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Hmgn5Q9JL35 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hmgn5Q9JL35 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hmgn5Q9JL35 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hmgn5Q9JL35 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hmgn5Q9JL35 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hmgn5Q9JL35 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hmgn5Q9JL35 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Gm9522-201ENSMUST00000182394 926 ntBASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Gm10576-201ENSMUST00000191927 825 ntBASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Gm9063-201ENSMUST00000223299 582 ntBASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgn5Q9JL35 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Gm42943-201ENSMUST00000199676 3242 ntBASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Gm24513-201ENSMUST00000174964 138 ntBASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Gm27397-201ENSMUST00000184997 107 ntBASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hmgn5Q9JL35 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms