Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgn3Q9DCB1 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgn3Q9DCB1 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgn3Q9DCB1 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Hmgn3Q9DCB1 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Hmgn3Q9DCB1 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Hmgn3Q9DCB1 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgn3Q9DCB1 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Hmgn3Q9DCB1 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgn3Q9DCB1 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgn3Q9DCB1 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgn3Q9DCB1 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgn3Q9DCB1 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgn3Q9DCB1 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgn3Q9DCB1 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hmgn3Q9DCB1 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Gm6447-201ENSMUST00000118905 835 ntBASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Gm27430-201ENSMUST00000184585 107 ntBASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Gm44333-201ENSMUST00000197168 107 ntBASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmgn3Q9DCB1 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Gm14701-201ENSMUST00000117156 348 ntBASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Gm11978-201ENSMUST00000122315 466 ntBASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmgn3Q9DCB1 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms