Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 Gm8738-201ENSMUST00000172606 329 ntBASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 Gm3890-201ENSMUST00000182416 207 ntBASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp2aQ9DB34 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp2aQ9DB34 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp2aQ9DB34 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp2aQ9DB34 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp2aQ9DB34 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
Chmp2aQ9DB34 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp2aQ9DB34 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Rubie-203ENSMUST00000227803 2430 ntBASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Gm13813-201ENSMUST00000120998 787 ntBASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Gm16379-201ENSMUST00000161469 348 ntBASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Gm38002-201ENSMUST00000193255 180 ntBASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Gm8762-201ENSMUST00000193486 339 ntBASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Gm18584-201ENSMUST00000203098 964 ntBASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.2□□□□□ -0.3
Chmp2aQ9DB34 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Cog3-203ENSMUST00000227473 4197 ntBASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Gm6023-201ENSMUST00000118217 606 ntBASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Gm42693-201ENSMUST00000196779 631 ntBASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Gm43630-201ENSMUST00000201550 776 ntBASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms