Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp5Q9D7S9 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Gm14921-201ENSMUST00000118643 908 ntBASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Gm13394-201ENSMUST00000121658 1000 ntBASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Gm14760-201ENSMUST00000121831 999 ntBASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Gm10576-201ENSMUST00000191927 825 ntBASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp5Q9D7S9 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Gm4735-201ENSMUST00000138679 1302 ntBASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Gm5855-201ENSMUST00000200240 1305 ntBASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Gm18624-201ENSMUST00000220966 658 ntBASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp5Q9D7S9 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp5Q9D7S9 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp5Q9D7S9 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Chmp5Q9D7S9 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC15.77■□□□□ 0.12
Chmp5Q9D7S9 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp5Q9D7S9 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp5Q9D7S9 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Chmp5Q9D7S9 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp5Q9D7S9 Gm14704-201ENSMUST00000120300 874 ntBASIC15.77■□□□□ 0.12
Chmp5Q9D7S9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp5Q9D7S9 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC15.77■□□□□ 0.12
Chmp5Q9D7S9 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.77■□□□□ 0.12
Chmp5Q9D7S9 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp5Q9D7S9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.77■□□□□ 0.12
Chmp5Q9D7S9 Mir6392-201ENSMUST00000184924 108 ntBASIC15.77■□□□□ 0.12
Chmp5Q9D7S9 Gm7063-201ENSMUST00000186840 981 ntBASIC15.77■□□□□ 0.12
Chmp5Q9D7S9 Gm2495-201ENSMUST00000191160 466 ntBASIC15.77■□□□□ 0.12
Chmp5Q9D7S9 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.77■□□□□ 0.12
Chmp5Q9D7S9 Gm43416-201ENSMUST00000201916 1015 ntBASIC15.77■□□□□ 0.12
Chmp5Q9D7S9 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp5Q9D7S9 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp5Q9D7S9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Chmp5Q9D7S9 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp5Q9D7S9 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Chmp5Q9D7S9 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chmp5Q9D7S9 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chmp5Q9D7S9 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Chmp5Q9D7S9 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chmp5Q9D7S9 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chmp5Q9D7S9 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Chmp5Q9D7S9 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chmp5Q9D7S9 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chmp5Q9D7S9 Gm18227-201ENSMUST00000211082 1468 ntBASIC15.77■□□□□ 0.11
Chmp5Q9D7S9 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chmp5Q9D7S9 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chmp5Q9D7S9 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
Chmp5Q9D7S9 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chmp5Q9D7S9 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chmp5Q9D7S9 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Chmp5Q9D7S9 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms