Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Gm6458-201ENSMUST00000211573 635 ntBASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chaf1bQ9D0N7 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Gm27989-201ENSMUST00000184721 107 ntBASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Gm29667-201ENSMUST00000190817 490 ntBASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Chaf1bQ9D0N7 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Gm13689-201ENSMUST00000119360 685 ntBASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Gm15487-201ENSMUST00000122373 465 ntBASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Gm28760-201ENSMUST00000185995 736 ntBASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Gm38223-201ENSMUST00000194484 695 ntBASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Gm44124-201ENSMUST00000204159 472 ntBASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 522.5 ms