Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Gm4857-201ENSMUST00000192718 785 ntBASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Lsm7Q9CQQ8 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm7Q9CQQ8 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm7Q9CQQ8 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm7Q9CQQ8 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm7Q9CQQ8 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm7Q9CQQ8 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm7Q9CQQ8 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm7Q9CQQ8 Grk6-205ENSMUST00000224653 2976 ntBASIC12.77□□□□□ -0.36
Lsm7Q9CQQ8 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm7Q9CQQ8 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm7Q9CQQ8 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Gm23270-201ENSMUST00000104055 131 ntBASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Gm25214-201ENSMUST00000104573 129 ntBASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Gm25043-201ENSMUST00000158604 212 ntBASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lsm7Q9CQQ8 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Rmrp-201ENSMUST00000157463 271 ntBASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Gm27046-201ENSMUST00000182160 463 ntBASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Gm3096-201ENSMUST00000185770 364 ntBASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Gm38241-201ENSMUST00000192641 898 ntBASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms