Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Chchd1Q9CQA6 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Chchd1Q9CQA6 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Chchd1Q9CQA6 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.48□□□□□ -0.89
Chchd1Q9CQA6 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Chchd1Q9CQA6 Gm37613-201ENSMUST00000195677 3580 ntBASIC9.48□□□□□ -0.89
Chchd1Q9CQA6 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Chchd1Q9CQA6 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chchd1Q9CQA6 Gm14132-201ENSMUST00000117188 1719 ntBASIC9.48□□□□□ -0.89
Chchd1Q9CQA6 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chchd1Q9CQA6 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Chchd1Q9CQA6 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Chchd1Q9CQA6 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Chchd1Q9CQA6 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chchd1Q9CQA6 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Chchd1Q9CQA6 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Gm43267-201ENSMUST00000199664 1796 ntBASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Gm9385-201ENSMUST00000117563 472 ntBASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Gm13385-201ENSMUST00000121089 220 ntBASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Ighv8-7-201ENSMUST00000194349 297 ntBASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chchd1Q9CQA6 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Chchd1Q9CQA6 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chchd1Q9CQA6 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chchd1Q9CQA6 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chchd1Q9CQA6 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chchd1Q9CQA6 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.46□□□□□ -0.89
Chchd1Q9CQA6 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Chchd1Q9CQA6 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Chchd1Q9CQA6 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chchd1Q9CQA6 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Chchd1Q9CQA6 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chchd1Q9CQA6 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chchd1Q9CQA6 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chchd1Q9CQA6 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chchd1Q9CQA6 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chchd1Q9CQA6 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Chchd1Q9CQA6 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chchd1Q9CQA6 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chchd1Q9CQA6 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chchd1Q9CQA6 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chchd1Q9CQA6 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Chchd1Q9CQA6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC9.46□□□□□ -0.9
Chchd1Q9CQA6 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chchd1Q9CQA6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Chchd1Q9CQA6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Chchd1Q9CQA6 Gm13886-201ENSMUST00000117876 1183 ntBASIC9.46□□□□□ -0.9
Chchd1Q9CQA6 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC9.46□□□□□ -0.9
Chchd1Q9CQA6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms