Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Gm7488-201ENSMUST00000117148 684 ntBASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Mir7654-201ENSMUST00000185082 70 ntBASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Gm10576-201ENSMUST00000191927 825 ntBASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ska1Q9CPV1 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.97□□□□□ -0.49
Ska1Q9CPV1 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.97□□□□□ -0.49
Ska1Q9CPV1 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Gm15823-201ENSMUST00000064305 670 ntBASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ska1Q9CPV1 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ska1Q9CPV1 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ska1Q9CPV1 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms