Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Gm14057-201ENSMUST00000120631 482 ntBASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Gm7063-201ENSMUST00000186840 981 ntBASIC11.41□□□□□ -0.58
Krt88Q9CPR6 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Gm6458-201ENSMUST00000211573 635 ntBASIC11.41□□□□□ -0.58
Krt88Q9CPR6 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Krt88Q9CPR6 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Gm21854-201ENSMUST00000179901 471 ntBASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Krt88Q9CPR6 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.4□□□□□ -0.58
Krt88Q9CPR6 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.4□□□□□ -0.58
Krt88Q9CPR6 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms