Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm28693-202ENSMUST00000190758 331 ntBASIC12.35□□□□□ -0.43
Msh4Q99MT2 Gm6458-201ENSMUST00000211573 635 ntBASIC12.35□□□□□ -0.43
Msh4Q99MT2 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.35□□□□□ -0.43
Msh4Q99MT2 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.34□□□□□ -0.43
Msh4Q99MT2 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh4Q99MT2 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh4Q99MT2 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.34□□□□□ -0.43
Msh4Q99MT2 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.34□□□□□ -0.43
Msh4Q99MT2 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Mir686-201ENSMUST00000102174 109 ntBASIC12.34□□□□□ -0.43
Msh4Q99MT2 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Mir1938-201ENSMUST00000158746 100 ntBASIC12.34□□□□□ -0.43
Msh4Q99MT2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.34□□□□□ -0.43
Msh4Q99MT2 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Gm10478-201ENSMUST00000084451 396 ntBASIC12.34□□□□□ -0.43
Msh4Q99MT2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.34□□□□□ -0.43
Msh4Q99MT2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Msh4Q99MT2 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Msh4Q99MT2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Msh4Q99MT2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Msh4Q99MT2 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Msh4Q99MT2 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh4Q99MT2 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.33□□□□□ -0.44
Msh4Q99MT2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.33□□□□□ -0.44
Msh4Q99MT2 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Msh4Q99MT2 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh4Q99MT2 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh4Q99MT2 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.33□□□□□ -0.44
Msh4Q99MT2 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Msh4Q99MT2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh4Q99MT2 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Msh4Q99MT2 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh4Q99MT2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh4Q99MT2 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Msh4Q99MT2 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.33□□□□□ -0.44
Msh4Q99MT2 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.33□□□□□ -0.44
Msh4Q99MT2 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Msh4Q99MT2 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh4Q99MT2 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.33□□□□□ -0.44
Msh4Q99MT2 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.33□□□□□ -0.44
Msh4Q99MT2 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.33□□□□□ -0.44
Msh4Q99MT2 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.33□□□□□ -0.44
Msh4Q99MT2 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh4Q99MT2 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.33□□□□□ -0.44
Msh4Q99MT2 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Msh4Q99MT2 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh4Q99MT2 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh4Q99MT2 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh4Q99MT2 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh4Q99MT2 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Msh4Q99MT2 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msh4Q99MT2 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Msh4Q99MT2 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Msh4Q99MT2 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms