Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.29□□□□□ -0.44
Rnf111Q99ML9 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Proscos-202ENSMUST00000178990 666 ntBASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Gm6458-201ENSMUST00000211573 635 ntBASIC12.28□□□□□ -0.44
Rnf111Q99ML9 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.28□□□□□ -0.44
Rnf111Q99ML9 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Rnf111Q99ML9 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.27□□□□□ -0.44
Rnf111Q99ML9 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.44
Rnf111Q99ML9 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Rnf111Q99ML9 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf111Q99ML9 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf111Q99ML9 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf111Q99ML9 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Gm11618-201ENSMUST00000117946 267 ntBASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Gm11978-201ENSMUST00000122315 466 ntBASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Gm27839-201ENSMUST00000184242 106 ntBASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf111Q99ML9 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms