Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Gm5866-201ENSMUST00000177881 973 ntBASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkd1Q99MH6 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Gm11618-201ENSMUST00000117946 267 ntBASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Nkd1Q99MH6 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Gm12291-201ENSMUST00000121627 311 ntBASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms