Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.13□□□□□ -0.63
Scrt1Q99M85 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Gm15276-201ENSMUST00000145953 498 ntBASIC11.13□□□□□ -0.63
Scrt1Q99M85 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Scrt1Q99M85 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.13□□□□□ -0.63
Scrt1Q99M85 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Gm44100-201ENSMUST00000204329 436 ntBASIC11.13□□□□□ -0.63
Scrt1Q99M85 Gm5950-201ENSMUST00000213337 772 ntBASIC11.13□□□□□ -0.63
Scrt1Q99M85 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Gm32025-201ENSMUST00000217960 307 ntBASIC11.13□□□□□ -0.63
Scrt1Q99M85 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.13□□□□□ -0.63
Scrt1Q99M85 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.13□□□□□ -0.63
Scrt1Q99M85 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scrt1Q99M85 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.12□□□□□ -0.63
Scrt1Q99M85 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.12□□□□□ -0.63
Scrt1Q99M85 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.12□□□□□ -0.63
Scrt1Q99M85 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.12□□□□□ -0.63
Scrt1Q99M85 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.12□□□□□ -0.63
Scrt1Q99M85 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.12□□□□□ -0.63
Scrt1Q99M85 Gm9083-201ENSMUST00000120423 819 ntBASIC11.12□□□□□ -0.63
Scrt1Q99M85 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.12□□□□□ -0.63
Scrt1Q99M85 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Mir1943-201ENSMUST00000158276 73 ntBASIC11.12□□□□□ -0.63
Scrt1Q99M85 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.12□□□□□ -0.63
Scrt1Q99M85 Gm45118-201ENSMUST00000208928 825 ntBASIC11.12□□□□□ -0.63
Scrt1Q99M85 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.12□□□□□ -0.63
Scrt1Q99M85 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.12□□□□□ -0.63
Scrt1Q99M85 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Scrt1Q99M85 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.12□□□□□ -0.63
Scrt1Q99M85 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms