Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clp1Q99LI9 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clp1Q99LI9 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clp1Q99LI9 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clp1Q99LI9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clp1Q99LI9 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clp1Q99LI9 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.32□□□□□ -0.28
Clp1Q99LI9 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Clp1Q99LI9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clp1Q99LI9 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clp1Q99LI9 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Clp1Q99LI9 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Clp1Q99LI9 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clp1Q99LI9 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clp1Q99LI9 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clp1Q99LI9 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.31□□□□□ -0.28
Clp1Q99LI9 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Gm11989-201ENSMUST00000117240 672 ntBASIC13.31□□□□□ -0.28
Clp1Q99LI9 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Gm11362-201ENSMUST00000118838 850 ntBASIC13.31□□□□□ -0.28
Clp1Q99LI9 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.31□□□□□ -0.28
Clp1Q99LI9 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.31□□□□□ -0.28
Clp1Q99LI9 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Clp1Q99LI9 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.31□□□□□ -0.28
Clp1Q99LI9 Gm10752-201ENSMUST00000218348 729 ntBASIC13.31□□□□□ -0.28
Clp1Q99LI9 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.31□□□□□ -0.28
Clp1Q99LI9 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.31□□□□□ -0.28
Clp1Q99LI9 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.31□□□□□ -0.28
Clp1Q99LI9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clp1Q99LI9 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clp1Q99LI9 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Clp1Q99LI9 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clp1Q99LI9 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clp1Q99LI9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clp1Q99LI9 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Clp1Q99LI9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clp1Q99LI9 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clp1Q99LI9 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Clp1Q99LI9 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clp1Q99LI9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clp1Q99LI9 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Clp1Q99LI9 Gm7851-201ENSMUST00000117574 323 ntBASIC13.3□□□□□ -0.28
Clp1Q99LI9 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.3□□□□□ -0.28
Clp1Q99LI9 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.3□□□□□ -0.28
Clp1Q99LI9 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.3□□□□□ -0.28
Clp1Q99LI9 Gm10051-201ENSMUST00000145209 414 ntBASIC13.3□□□□□ -0.28
Clp1Q99LI9 Gm43916-201ENSMUST00000205062 967 ntBASIC13.3□□□□□ -0.28
Clp1Q99LI9 Gm45219-201ENSMUST00000205602 465 ntBASIC13.3□□□□□ -0.28
Clp1Q99LI9 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clp1Q99LI9 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.3□□□□□ -0.28
Clp1Q99LI9 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clp1Q99LI9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clp1Q99LI9 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.3□□□□□ -0.28
Clp1Q99LI9 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.3□□□□□ -0.28
Clp1Q99LI9 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.3□□□□□ -0.28
Clp1Q99LI9 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clp1Q99LI9 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.3□□□□□ -0.28
Clp1Q99LI9 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.3□□□□□ -0.28
Clp1Q99LI9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Clp1Q99LI9 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clp1Q99LI9 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clp1Q99LI9 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Clp1Q99LI9 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clp1Q99LI9 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clp1Q99LI9 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.29□□□□□ -0.28
Clp1Q99LI9 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clp1Q99LI9 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Clp1Q99LI9 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms