Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk9Q99J95 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.77□□□□□ -0.37
Cdk9Q99J95 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.77□□□□□ -0.37
Cdk9Q99J95 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk9Q99J95 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk9Q99J95 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk9Q99J95 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk9Q99J95 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk9Q99J95 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdk9Q99J95 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cdk9Q99J95 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.76□□□□□ -0.37
Cdk9Q99J95 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Gm16215-201ENSMUST00000161990 637 ntBASIC12.76□□□□□ -0.37
Cdk9Q99J95 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Gm9522-201ENSMUST00000182394 926 ntBASIC12.76□□□□□ -0.37
Cdk9Q99J95 Gm29608-201ENSMUST00000190444 463 ntBASIC12.76□□□□□ -0.37
Cdk9Q99J95 Gm29667-201ENSMUST00000190817 490 ntBASIC12.76□□□□□ -0.37
Cdk9Q99J95 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.76□□□□□ -0.37
Cdk9Q99J95 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Map1b-203ENSMUST00000223725 2669 ntBASIC12.76□□□□□ -0.37
Cdk9Q99J95 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.76□□□□□ -0.37
Cdk9Q99J95 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.76□□□□□ -0.37
Cdk9Q99J95 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk9Q99J95 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk9Q99J95 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Gm15321-201ENSMUST00000121290 288 ntBASIC12.75□□□□□ -0.37
Cdk9Q99J95 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk9Q99J95 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Gm43094-201ENSMUST00000196549 921 ntBASIC12.75□□□□□ -0.37
Cdk9Q99J95 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cdk9Q99J95 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cdk9Q99J95 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk9Q99J95 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.75□□□□□ -0.37
Cdk9Q99J95 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Gm2423-201ENSMUST00000074863 733 ntBASIC12.75□□□□□ -0.37
Cdk9Q99J95 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk9Q99J95 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cdk9Q99J95 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.74□□□□□ -0.37
Cdk9Q99J95 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms