Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Thumpd1Q99J36 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Thumpd1Q99J36 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Thumpd1Q99J36 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Thumpd1Q99J36 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.27□□□□□ -0.6
Thumpd1Q99J36 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Thumpd1Q99J36 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Thumpd1Q99J36 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Thumpd1Q99J36 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Thumpd1Q99J36 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Thumpd1Q99J36 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Thumpd1Q99J36 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.27□□□□□ -0.6
Thumpd1Q99J36 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Thumpd1Q99J36 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Thumpd1Q99J36 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Thumpd1Q99J36 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Thumpd1Q99J36 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Thumpd1Q99J36 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.27□□□□□ -0.6
Thumpd1Q99J36 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Thumpd1Q99J36 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Gm13616-201ENSMUST00000120600 222 ntBASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Gm27989-201ENSMUST00000184721 107 ntBASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Gm28693-202ENSMUST00000190758 331 ntBASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Gm19220-201ENSMUST00000222682 803 ntBASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Thumpd1Q99J36 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Gm14760-201ENSMUST00000121831 999 ntBASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.26□□□□□ -0.61
Thumpd1Q99J36 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Thumpd1Q99J36 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms