Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdha3Q91Y16 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdha3Q91Y16 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Gm23931-201ENSMUST00000103842 109 ntBASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Gm14921-201ENSMUST00000118643 908 ntBASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Gm14704-201ENSMUST00000120300 874 ntBASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Gm27572-201ENSMUST00000183702 255 ntBASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Gm43438-201ENSMUST00000198133 379 ntBASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Gm6013-201ENSMUST00000212264 699 ntBASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdha3Q91Y16 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms