Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Gm18584-201ENSMUST00000203098 964 ntBASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Gm44124-201ENSMUST00000204159 472 ntBASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.31
Pcdhb1Q91Y08 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdhb1Q91Y08 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdhb1Q91Y08 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdhb1Q91Y08 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Gm11964-201ENSMUST00000120982 444 ntBASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Gm25927-201ENSMUST00000175058 117 ntBASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Gm27731-201ENSMUST00000185192 107 ntBASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb1Q91Y08 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Gm24231-201ENSMUST00000104315 133 ntBASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Gm13226-201ENSMUST00000117838 404 ntBASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Gm14660-201ENSMUST00000119809 575 ntBASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Gm11591-201ENSMUST00000120063 702 ntBASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Mir7085-201ENSMUST00000184353 66 ntBASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Gm45784-201ENSMUST00000188360 142 ntBASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms