Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Gm11597-201ENSMUST00000121423 964 ntBASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Gm43630-201ENSMUST00000201550 776 ntBASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb22Q91XZ8 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb22Q91XZ8 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb22Q91XZ8 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb22Q91XZ8 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb22Q91XZ8 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb22Q91XZ8 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
Pcdhb22Q91XZ8 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.77□□□□□ -0.04
Pcdhb22Q91XZ8 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb22Q91XZ8 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb22Q91XZ8 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.77□□□□□ -0.04
Pcdhb22Q91XZ8 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb22Q91XZ8 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb22Q91XZ8 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.77□□□□□ -0.04
Pcdhb22Q91XZ8 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.77□□□□□ -0.04
Pcdhb22Q91XZ8 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb22Q91XZ8 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb22Q91XZ8 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb22Q91XZ8 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdhb22Q91XZ8 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb22Q91XZ8 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.77□□□□□ -0.05
Pcdhb22Q91XZ8 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb22Q91XZ8 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb22Q91XZ8 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb22Q91XZ8 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdhb22Q91XZ8 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb22Q91XZ8 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb22Q91XZ8 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb22Q91XZ8 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb22Q91XZ8 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb22Q91XZ8 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb22Q91XZ8 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb22Q91XZ8 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Gm12058-201ENSMUST00000118614 437 ntBASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Gm13342-201ENSMUST00000121055 207 ntBASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Gm29396-201ENSMUST00000185659 716 ntBASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Olfr284-202ENSMUST00000206647 966 ntBASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Gm7046-201ENSMUST00000221351 977 ntBASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.76□□□□□ -0.05
Pcdhb22Q91XZ8 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms