Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Gm28693-202ENSMUST00000190758 331 ntBASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb4Q91XZ6 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Gm8805-201ENSMUST00000117848 313 ntBASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Gm11618-201ENSMUST00000117946 267 ntBASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Gm8598-201ENSMUST00000221184 836 ntBASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdhb4Q91XZ6 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Gm10156-201ENSMUST00000122364 462 ntBASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Proscos-202ENSMUST00000178990 666 ntBASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.59□□□□□ -0.39
Pcdhb4Q91XZ6 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms