Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb8Q91XZ2 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb8Q91XZ2 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
Pcdhb8Q91XZ2 Gm6091-201ENSMUST00000098307 165 ntBASIC12.39□□□□□ -0.43
Pcdhb8Q91XZ2 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhb8Q91XZ2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb8Q91XZ2 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb8Q91XZ2 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb8Q91XZ2 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhb8Q91XZ2 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb8Q91XZ2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhb8Q91XZ2 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb8Q91XZ2 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb8Q91XZ2 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb8Q91XZ2 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb8Q91XZ2 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb8Q91XZ2 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb8Q91XZ2 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb8Q91XZ2 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhb8Q91XZ2 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Snord83b-201ENSMUST00000104546 94 ntBASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.38□□□□□ -0.43
Pcdhb8Q91XZ2 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Gm29649-201ENSMUST00000185649 419 ntBASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Gm19163-201ENSMUST00000223313 780 ntBASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb8Q91XZ2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms