Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Gm37466-201ENSMUST00000195692 652 ntBASIC13.53□□□□□ -0.24
TraipQ8VIG6 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.53□□□□□ -0.24
TraipQ8VIG6 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Gm10312-201ENSMUST00000078515 489 ntBASIC13.53□□□□□ -0.24
TraipQ8VIG6 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TraipQ8VIG6 M1ap-201ENSMUST00000113980 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TraipQ8VIG6 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.52□□□□□ -0.24
TraipQ8VIG6 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.52□□□□□ -0.24
TraipQ8VIG6 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TraipQ8VIG6 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TraipQ8VIG6 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TraipQ8VIG6 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TraipQ8VIG6 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
TraipQ8VIG6 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TraipQ8VIG6 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TraipQ8VIG6 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.52□□□□□ -0.25
TraipQ8VIG6 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.52□□□□□ -0.25
TraipQ8VIG6 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.52□□□□□ -0.25
TraipQ8VIG6 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Rmrp-201ENSMUST00000157463 271 ntBASIC13.52□□□□□ -0.25
TraipQ8VIG6 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.52□□□□□ -0.25
TraipQ8VIG6 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.52□□□□□ -0.25
TraipQ8VIG6 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Gm39404-201ENSMUST00000216350 313 ntBASIC13.52□□□□□ -0.25
TraipQ8VIG6 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.52□□□□□ -0.25
TraipQ8VIG6 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TraipQ8VIG6 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.52□□□□□ -0.25
TraipQ8VIG6 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
TraipQ8VIG6 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Matn2-206ENSMUST00000228570 2798 ntBASIC13.51□□□□□ -0.25
TraipQ8VIG6 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.51□□□□□ -0.25
TraipQ8VIG6 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.51□□□□□ -0.25
TraipQ8VIG6 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TraipQ8VIG6 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms