Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim60Q8VI40 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim60Q8VI40 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.08□□□□□ -0.32
Trim60Q8VI40 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trim60Q8VI40 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.07□□□□□ -0.32
Trim60Q8VI40 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Gm8805-201ENSMUST00000117848 313 ntBASIC13.07□□□□□ -0.32
Trim60Q8VI40 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.07□□□□□ -0.32
Trim60Q8VI40 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.07□□□□□ -0.32
Trim60Q8VI40 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.07□□□□□ -0.32
Trim60Q8VI40 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.07□□□□□ -0.32
Trim60Q8VI40 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.07□□□□□ -0.32
Trim60Q8VI40 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.07□□□□□ -0.32
Trim60Q8VI40 Gm18018-201ENSMUST00000198273 408 ntBASIC13.07□□□□□ -0.32
Trim60Q8VI40 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Gm7287-201ENSMUST00000205267 602 ntBASIC13.07□□□□□ -0.32
Trim60Q8VI40 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.07□□□□□ -0.32
Trim60Q8VI40 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.07□□□□□ -0.32
Trim60Q8VI40 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.07□□□□□ -0.32
Trim60Q8VI40 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim60Q8VI40 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Gm16479-201ENSMUST00000121706 932 ntBASIC13.06□□□□□ -0.32
Trim60Q8VI40 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim60Q8VI40 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Gm2423-201ENSMUST00000074863 733 ntBASIC13.06□□□□□ -0.32
Trim60Q8VI40 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.06□□□□□ -0.32
Trim60Q8VI40 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim60Q8VI40 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms