Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa1Q8VEE4 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Gm43452-201ENSMUST00000201873 991 ntBASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 BC043934-202ENSMUST00000185694 2356 ntBASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpa1Q8VEE4 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Gm15376-201ENSMUST00000122258 783 ntBASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rpa1Q8VEE4 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms