Protein–RNA interactions for Protein: Q8VD57

Sft2d2, Vesicle transport protein SFT2B, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d2Q8VD57 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Gm13884-201ENSMUST00000118103 829 ntBASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Gm15240-201ENSMUST00000118156 720 ntBASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Mir8117-201ENSMUST00000184773 107 ntBASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Gm29541-201ENSMUST00000191351 678 ntBASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 AC131710.1-201ENSMUST00000228336 990 ntBASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Gm42690-201ENSMUST00000197921 1836 ntBASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sft2d2Q8VD57 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Gm12585-201ENSMUST00000117307 290 ntBASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Mir1897-201ENSMUST00000122581 272 ntBASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 AC126408.1-201ENSMUST00000225184 523 ntBASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sft2d2Q8VD57 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms