Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ndc1Q8VCB1 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Gm24255-201ENSMUST00000104481 128 ntBASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Gm27320-201ENSMUST00000184892 109 ntBASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Gm37259-201ENSMUST00000193903 849 ntBASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Gm5904-201ENSMUST00000210286 865 ntBASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ndc1Q8VCB1 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ndc1Q8VCB1 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Ndc1Q8VCB1 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Ndc1Q8VCB1 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.96□□□□□ -0.5
Ndc1Q8VCB1 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ndc1Q8VCB1 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.96□□□□□ -0.5
Ndc1Q8VCB1 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Ndc1Q8VCB1 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ndc1Q8VCB1 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Ndc1Q8VCB1 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Gm4857-201ENSMUST00000192718 785 ntBASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ndc1Q8VCB1 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms