Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.25□□□□□ -0.45
Rnf8Q8VC56 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf8Q8VC56 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf8Q8VC56 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf8Q8VC56 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf8Q8VC56 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.25□□□□□ -0.45
Rnf8Q8VC56 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf8Q8VC56 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf8Q8VC56 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf8Q8VC56 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf8Q8VC56 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.25□□□□□ -0.45
Rnf8Q8VC56 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf8Q8VC56 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf8Q8VC56 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.25□□□□□ -0.45
Rnf8Q8VC56 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.25□□□□□ -0.45
Rnf8Q8VC56 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf8Q8VC56 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf8Q8VC56 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf8Q8VC56 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf8Q8VC56 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf8Q8VC56 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.25□□□□□ -0.45
Rnf8Q8VC56 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.25□□□□□ -0.45
Rnf8Q8VC56 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf8Q8VC56 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf8Q8VC56 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf8Q8VC56 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Gm6447-201ENSMUST00000118905 835 ntBASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Gm15824-201ENSMUST00000119516 955 ntBASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Gm17150-201ENSMUST00000165577 381 ntBASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf8Q8VC56 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rnf8Q8VC56 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf8Q8VC56 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf8Q8VC56 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf8Q8VC56 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf8Q8VC56 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf8Q8VC56 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Rnf8Q8VC56 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rnf8Q8VC56 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.23□□□□□ -0.45
Rnf8Q8VC56 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf8Q8VC56 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf8Q8VC56 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rnf8Q8VC56 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf8Q8VC56 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf8Q8VC56 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.23□□□□□ -0.45
Rnf8Q8VC56 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.23□□□□□ -0.45
Rnf8Q8VC56 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf8Q8VC56 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rnf8Q8VC56 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf8Q8VC56 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf8Q8VC56 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf8Q8VC56 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Rnf8Q8VC56 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf8Q8VC56 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf8Q8VC56 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.23□□□□□ -0.45
Rnf8Q8VC56 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.23□□□□□ -0.45
Rnf8Q8VC56 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf8Q8VC56 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms