Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Itm2b-204ENSMUST00000228637 783 ntBASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nup35Q8R4R6 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Gm5687-201ENSMUST00000118252 640 ntBASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Gm6736-201ENSMUST00000166583 948 ntBASIC10.3□□□□□ -0.76
Nup35Q8R4R6 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Gm27838-201ENSMUST00000184829 128 ntBASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.3□□□□□ -0.76
Nup35Q8R4R6 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.3□□□□□ -0.76
Nup35Q8R4R6 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Gm14921-201ENSMUST00000118643 908 ntBASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Gm13616-201ENSMUST00000120600 222 ntBASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Gm14760-201ENSMUST00000121831 999 ntBASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Gm15487-201ENSMUST00000122373 465 ntBASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Gm27702-201ENSMUST00000184512 56 ntBASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Gm31326-201ENSMUST00000191856 1048 ntBASIC10.29□□□□□ -0.76
Nup35Q8R4R6 Gm37171-201ENSMUST00000192636 1185 ntBASIC10.29□□□□□ -0.76
Nup35Q8R4R6 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms