Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Gm35960-201ENSMUST00000202712 767 ntBASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Gm45195-201ENSMUST00000205597 1008 ntBASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Gm9797-201ENSMUST00000052902 613 ntBASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Tsen54Q8C2A2 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Gm7488-201ENSMUST00000117148 684 ntBASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Gm27390-201ENSMUST00000184516 176 ntBASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Tsen54Q8C2A2 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.6□□□□□ -0.71
Tsen54Q8C2A2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms