Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Gm14350-201ENSMUST00000116642 640 ntBASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Gm27701-201ENSMUST00000184498 110 ntBASIC11.86□□□□□ -0.51
Vps9d1Q8C190 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Gm25857-201ENSMUST00000082788 129 ntBASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vps9d1Q8C190 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Gm16202-201ENSMUST00000117532 544 ntBASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Gm15429-201ENSMUST00000151268 798 ntBASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Gm28911-201ENSMUST00000188837 117 ntBASIC11.85□□□□□ -0.51
Vps9d1Q8C190 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Gm44397-201ENSMUST00000195950 113 ntBASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vps9d1Q8C190 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Vps9d1Q8C190 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Vps9d1Q8C190 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vps9d1Q8C190 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps9d1Q8C190 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps9d1Q8C190 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps9d1Q8C190 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps9d1Q8C190 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Vps9d1Q8C190 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Vps9d1Q8C190 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vps9d1Q8C190 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vps9d1Q8C190 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms