Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim35Q8C006 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trim35Q8C006 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Gm29601-201ENSMUST00000187961 1349 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Cyp2c53-ps-202ENSMUST00000175960 1370 ntBASIC14.05□□□□□ -0.16
Trim35Q8C006 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trim35Q8C006 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim35Q8C006 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Trim35Q8C006 AU019990-202ENSMUST00000143964 1614 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Trim35Q8C006 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim35Q8C006 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim35Q8C006 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim35Q8C006 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.04□□□□□ -0.16
Trim35Q8C006 Tpt1-ps5-201ENSMUST00000112150 516 ntBASIC14.04□□□□□ -0.16
Trim35Q8C006 Gm13453-201ENSMUST00000118708 357 ntBASIC14.04□□□□□ -0.16
Trim35Q8C006 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC14.04□□□□□ -0.16
Trim35Q8C006 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim35Q8C006 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC14.04□□□□□ -0.16
Trim35Q8C006 Gm20949-201ENSMUST00000206478 952 ntBASIC14.04□□□□□ -0.16
Trim35Q8C006 Gm18599-201ENSMUST00000206729 1125 ntBASIC14.04□□□□□ -0.16
Trim35Q8C006 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 Gm18127-201ENSMUST00000208479 725 ntBASIC14.04□□□□□ -0.16
Trim35Q8C006 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim35Q8C006 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC14.04□□□□□ -0.16
Trim35Q8C006 AC099629.1-201ENSMUST00000226778 464 ntBASIC14.04□□□□□ -0.16
Trim35Q8C006 AC116596.2-203ENSMUST00000227345 731 ntBASIC14.04□□□□□ -0.16
Trim35Q8C006 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trim35Q8C006 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.04□□□□□ -0.16
Trim35Q8C006 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim35Q8C006 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Trim35Q8C006 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim35Q8C006 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim35Q8C006 Fxr1-202ENSMUST00000167354 1986 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim35Q8C006 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim35Q8C006 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim35Q8C006 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim35Q8C006 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim35Q8C006 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim35Q8C006 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim35Q8C006 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim35Q8C006 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm8410-201ENSMUST00000117225 605 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm15185-201ENSMUST00000117397 746 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim35Q8C006 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm9719-201ENSMUST00000162765 543 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm3025-201ENSMUST00000163454 489 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm3077-201ENSMUST00000165903 627 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm2878-201ENSMUST00000170173 486 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Trim35Q8C006 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trim35Q8C006 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm29310-201ENSMUST00000185468 696 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm9553-201ENSMUST00000185703 996 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm21825-201ENSMUST00000185728 696 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm29109-201ENSMUST00000185895 696 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm21896-201ENSMUST00000186520 696 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm21873-201ENSMUST00000186728 696 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm21794-201ENSMUST00000187056 696 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm21880-201ENSMUST00000187275 696 ntBASIC14.03□□□□□ -0.16
Trim35Q8C006 Gm21826-201ENSMUST00000187451 696 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms