Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Gm11597-201ENSMUST00000121423 964 ntBASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Gm26461-201ENSMUST00000175064 290 ntBASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Mir3102-201ENSMUST00000175555 104 ntBASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Gm2260-201ENSMUST00000184965 657 ntBASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Gm39404-201ENSMUST00000216350 313 ntBASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Gm10312-201ENSMUST00000078515 489 ntBASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sh3rf2Q8BZT2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Gm24990-201ENSMUST00000157406 323 ntBASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Gm24845-201ENSMUST00000158034 109 ntBASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Gm18212-201ENSMUST00000211678 889 ntBASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Gm10076-201ENSMUST00000073238 384 ntBASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sh3rf2Q8BZT2 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Gm14832-201ENSMUST00000121289 322 ntBASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Gm26361-201ENSMUST00000158868 186 ntBASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Gm25700-201ENSMUST00000177693 110 ntBASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Gm16505-201ENSMUST00000179981 232 ntBASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.81□□□□□ -0.36
Sh3rf2Q8BZT2 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms