Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm5859-201ENSMUST00000165401 2324 ntBASIC13.43□□□□□ -0.26
Trerf1Q8BXJ2 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trerf1Q8BXJ2 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trerf1Q8BXJ2 Mir7221-201ENSMUST00000184009 72 ntBASIC13.43□□□□□ -0.26
Trerf1Q8BXJ2 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.43□□□□□ -0.26
Trerf1Q8BXJ2 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.43□□□□□ -0.26
Trerf1Q8BXJ2 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.43□□□□□ -0.26
Trerf1Q8BXJ2 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC13.43□□□□□ -0.26
Trerf1Q8BXJ2 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.43□□□□□ -0.26
Trerf1Q8BXJ2 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trerf1Q8BXJ2 Gm9396-201ENSMUST00000076703 567 ntBASIC13.43□□□□□ -0.26
Trerf1Q8BXJ2 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trerf1Q8BXJ2 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trerf1Q8BXJ2 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trerf1Q8BXJ2 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trerf1Q8BXJ2 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trerf1Q8BXJ2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trerf1Q8BXJ2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trerf1Q8BXJ2 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trerf1Q8BXJ2 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trerf1Q8BXJ2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trerf1Q8BXJ2 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trerf1Q8BXJ2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Gm8213-201ENSMUST00000118191 441 ntBASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Mir7085-201ENSMUST00000184353 66 ntBASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Gm29649-201ENSMUST00000185649 419 ntBASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 AC129336.1-201ENSMUST00000220224 2277 ntBASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.42□□□□□ -0.26
Trerf1Q8BXJ2 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Mir874-201ENSMUST00000104769 76 ntBASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Gm10156-201ENSMUST00000122364 462 ntBASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Gm44069-201ENSMUST00000204898 506 ntBASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Gm16372-201ENSMUST00000073088 450 ntBASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trerf1Q8BXJ2 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms