Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc40Q8BI79 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ccdc40Q8BI79 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc40Q8BI79 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc40Q8BI79 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc40Q8BI79 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Ccdc40Q8BI79 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ccdc40Q8BI79 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.27□□□□□ -0.29
Ccdc40Q8BI79 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc40Q8BI79 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc40Q8BI79 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccdc40Q8BI79 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc40Q8BI79 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Gm6244-201ENSMUST00000178732 841 ntBASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc40Q8BI79 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Gm12490-201ENSMUST00000120255 560 ntBASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Gm27892-201ENSMUST00000185017 106 ntBASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc40Q8BI79 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms