Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Gm5187-201ENSMUST00000117317 991 ntBASIC12.53□□□□□ -0.4
Ubp1Q811S7 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Gm13813-201ENSMUST00000120998 787 ntBASIC12.53□□□□□ -0.4
Ubp1Q811S7 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.53□□□□□ -0.4
Ubp1Q811S7 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.53□□□□□ -0.4
Ubp1Q811S7 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.53□□□□□ -0.4
Ubp1Q811S7 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ubp1Q811S7 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Ubp1Q811S7 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.4
Ubp1Q811S7 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ubp1Q811S7 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ubp1Q811S7 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.52□□□□□ -0.4
Ubp1Q811S7 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ubp1Q811S7 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ubp1Q811S7 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Gm12502-201ENSMUST00000120197 444 ntBASIC12.52□□□□□ -0.41
Ubp1Q811S7 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Gm7809-201ENSMUST00000153199 742 ntBASIC12.52□□□□□ -0.41
Ubp1Q811S7 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.52□□□□□ -0.41
Ubp1Q811S7 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Gm27572-201ENSMUST00000183702 255 ntBASIC12.52□□□□□ -0.41
Ubp1Q811S7 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.52□□□□□ -0.41
Ubp1Q811S7 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Gm45880-201ENSMUST00000213041 853 ntBASIC12.52□□□□□ -0.41
Ubp1Q811S7 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.52□□□□□ -0.41
Ubp1Q811S7 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.52□□□□□ -0.41
Ubp1Q811S7 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubp1Q811S7 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.51□□□□□ -0.41
Ubp1Q811S7 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Gm22018-201ENSMUST00000104357 131 ntBASIC12.51□□□□□ -0.41
Ubp1Q811S7 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.51□□□□□ -0.41
Ubp1Q811S7 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms