Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Gm5051-201ENSMUST00000204085 485 ntBASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf38bQ80SY5 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Gm44100-201ENSMUST00000204329 436 ntBASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Prpf38bQ80SY5 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Gm16479-201ENSMUST00000121706 932 ntBASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Gm12208-201ENSMUST00000122004 163 ntBASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Gm13570-201ENSMUST00000140763 309 ntBASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Gm44967-201ENSMUST00000207047 631 ntBASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms