Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Gm12859-201ENSMUST00000117834 427 ntBASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Gm12291-201ENSMUST00000121627 311 ntBASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Gm28693-202ENSMUST00000190758 331 ntBASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Gm2423-201ENSMUST00000074863 733 ntBASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Smarcd3Q6P9Z1 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Gm15823-201ENSMUST00000064305 670 ntBASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd3Q6P9Z1 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms